geneViz_extrCDS: Extract CDS
Description
Extract CDS coordinates within a GRanges object given a transcription
database
Usage
geneViz_extrCDS(txdb = NULL, gr = NULL, reduce = FALSE, gaps = FALSE)
Arguments
txdb
A TxDb object for a genome
gr
A Granges object specifying the region of interest
reduce
Boolean specifying whether to collapse isoforms
gaps
Boolean specifying whether to report space between CDS instead of
CDS
Value
Object of class Granges list