geneViz_formatCDS: format cds
Description
given a Granges object specifying a region of interest, format into a form
recognizable by ggplot2
Usage
geneViz_formatCDS(txdb = NULL, gr = NULL, genome = NULL, reduce = FALSE)
Arguments
txdb
A TxDb object for a genome
gr
A Granges object to format
genome
Object of class BSgenome specifying the genome for GC content
calculation
reduce
Boolean specifying whether to collapse isoforms in the Granges
object ROI
Value
Object of class data frame