character string specifying which directory contains
the sample information stored as datasets with columns "chromosome",
"position", "n_vaf", "t_vaf", and "sample" (required if x is not specified)
fileExt
character string specifying the file extensions of files
step
integer with the length of divisions (bp) in chromosomes
window_size
Integer value specifying the size of the window in base
pairs in which to calculate the mean Loss of Heterozygosity.
gender
vector of length equal to the number of samples, consisting of
elements from the set "M", "F"
Value
object of class data frame from data specified in path for lohSpec