GenVisR (version 1.0.4)

lohView_buildMain: construct loh plot

Description

given a loh data frame plot points in ggplot

Usage

lohView_buildMain(x, y, chr, layers = NULL)

Arguments

x

a data frame with columns chromosome, position, n_vaf, t_vaf, sample

y

a data frame with columns chromosome, coordinate for plotting chromosome boundaries

chr

a character string specifying chromosome

layers

additional ggplot2 layers to add

Value

ggplot2 object