GenVisR (version 1.0.4)

waterfall_geneRecurCutoff: Mutation Recurrence Cutoff

Description

Subset a MAF file keeping only samples that meet a mutation recurrence cutoff

Usage

waterfall_geneRecurCutoff(x, recurrence_cutoff)

Arguments

x

data frame in long format with columns 'gene', 'trv_type', 'sample'

recurrence_cutoff

integer specifying removal of entries not seen in at least "x" percent of samples

Value

a subset data frame