GeneBreak (version 1.2.0)

featuresPerGene,CopyNumberBreakPointGenes-method: Access Object featuresPerGene. This method returns a vector with gene-related features for a particular gene.

Description

Access Object featuresPerGene. This method returns a vector with gene-related features for a particular gene.

Usage

"featuresPerGene"(object, geneName = NULL)

Arguments

object

An object of class CopyNumberBreakPoints

geneName

Exact Gene name as in the annotation

Value

a vector with gene-related features

Examples

data( copynumber.data.chr20 )
data( ens.gene.ann.hg18 )
bp <- getBreakpoints( copynumber.data.chr20 )
bp <- bpFilter( bp )
bp <- addGeneAnnotation( bp, ens.gene.ann.hg18 )
bp <- bpGenes( bp )

featuresPerGene( bp, geneName="PCMTD2" )