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GeneCycle (version 1.1.5)

Identification of Periodically Expressed Genes

Description

The GeneCycle package implements the approaches of Wichert et al. (2004) , Ahdesmaki et al. (2005) and Ahdesmaki et al. (2007) for detecting periodically expressed genes from gene expression time series data.

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Install

install.packages('GeneCycle')

Monthly Downloads

267

Version

1.1.5

License

GPL (>= 3)

Maintainer

Last Published

January 5th, 2021

Functions in GeneCycle (1.1.5)

caulobacter

Microarray Time Series Data for 1444 Caulobacter Crescentus Genes
dominant.freqs

Dominant Frequencies in Multiple (Genetic) Time Series
periodogram

Periodogram Power Spectral Density
robust.g.test

Robust g Test for Multiple (Genetic) Time Series
avgp

Average Periodogram for Multiple (Genetic) Time Series
GeneCycle-internal

Internal GeneCycle Functions
is.constant

Simple Check for Constant Time Series
fisher.g.test

Fisher's Exact g Test for Multiple (Genetic) Time Series