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GeneCycle (version 1.1.6)

Identification of Periodically Expressed Genes

Description

The GeneCycle package implements the approaches of Wichert et al. (2004) , Ahdesmaki et al. (2005) and Ahdesmaki et al. (2007) for detecting periodically expressed genes from gene expression time series data.

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Install

install.packages('GeneCycle')

Monthly Downloads

341

Version

1.1.6

License

GPL (>= 3)

Maintainer

Miika Ahdesmaki

Last Published

April 2nd, 2025

Functions in GeneCycle (1.1.6)

avgp

Average Periodogram for Multiple (Genetic) Time Series
fisher.g.test

Fisher's Exact g Test for Multiple (Genetic) Time Series
dominant.freqs

Dominant Frequencies in Multiple (Genetic) Time Series
GeneCycle-internal

Internal GeneCycle Functions
caulobacter

Microarray Time Series Data for 1444 Caulobacter Crescentus Genes
periodogram

Periodogram Power Spectral Density
is.constant

Simple Check for Constant Time Series
robust.g.test

Robust g Test for Multiple (Genetic) Time Series