PlotFreq

path.mcmc

ipop

iloc

Integer number : index of allele. If <code>MCMC</code>
     was launched with option <code>filter.null.alleles=TRUE</code>, an extra
     fictive allele standing for putative null alleles is created. It
     estimated frequency can be also plotted. If there is say, 5 alleles
   at a locus, the estimated frequency of null alleles can be seen
   invoking <code>PlotFreq</code> with <code>iall=6</code>.

iall

Logical : if TRUE, figures are also printed

printit

Character : Path to directory where figures
     should be printed

path

Plot of allele frequencies in present time populations number
  <code>ipop</code>,
  for allele <code>iall</code>  of locus <code>iloc</code>

Stochastic simulation and MCMC inference of structure from genetic data.

PlotFreq: Plot the trace of allele frequencies in present time population and optionnaly print it.

Description

Usage

Arguments