GiNA (version 1.0.1)

High Throughput Phenotyping

Description

Performs image segmentation in fruit or seeds pictures in order to measure physical features in a high-throughput manner for genome-wide association (GWAS) and genomic selection programs.

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Version

Install

install.packages('GiNA')

Monthly Downloads

123

Version

1.0.1

License

GPL-3

Maintainer

Giovanny CovarrubiasPazaran

Last Published

April 9th, 2016

Functions in GiNA (1.0.1)

brewer.pal

Generate a sequence of colors for groups.

color.plot

Analyzing the digital color of objects

scanCRAN

High throughput phenotyping using scanCRAN

GiNA-package

Software for high throughput phenotyping of fruit crops

jet.scan

Assessing variability for measurements using jet plot

pixArea

Finding the average area in pixels for objects

GINA.sample

cranberry image

cutoff

Finding the optimal cutoff value for segmentation