invbaselogit: Converts a set of k-1 baseline logits into a set of probabilities
Description
Converts a set of $k-1$ baseline logits $\log (p_1/p_k),...,\log (p_{k-1}/p_k)$ into a set of probabilities $p_1,...,p_k$, where $k$ is the number of alleles.
Usage
invbaselogit(baselogit)
Arguments
baselogit
A set of $k-1$ baseline logits, where $k$ is the number of alleles.
Value
invbaselogitthe probability vector corresponding to the baseline logit
Details
This is used by a number of other functions in the package, for example, to provide a parameterization for maximization and for importance sampling in the single $f$ model.
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg
equilibrium. Biometrics; Vol 66:257-65