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IBDLabels (version 1.1)

Convert Between Different IBD-State Labelling Schemes

Description

Convert "label", "lexicographic", "jacquard" and "vec", full state description vector. All conversions are done to and from "label", as used in IBD_Haplo. More information regarding IBD_Haplo can be found at http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml.

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Version

Install

install.packages('IBDLabels')

Monthly Downloads

13

Version

1.1

License

GPL-3

Maintainer

Fiona Grimson

Last Published

February 17th, 2015

Functions in IBDLabels (1.1)

allStates

Conversion Table for all labelling schemes
maxlabel

Maximum Label for given number gametes
IBDLabel

Convert between different IBD-state labelling schemes
State Vectors

IBD state vectors
Lexicographic

Lexicographic ordering
allJaq

Jacquard ordering