IGM.MEA (version 0.3.4.1)

IGM.plot.plate.summary.for.bursts: Plot burst features

Description

Plots all bursting features in a _burst_plot.pdf under the output directory.

Usage

IGM.plot.plate.summary.for.bursts(s, outputdir,parameters)

Arguments

s

MEA data structure

outputdir

Output directory

parameters

IGM.MEA basic parameter list

Value

A _burst_plot.pdf is printed under the output directory

Details

The plot function will plot all the features calculated for the bursts in the recording. Those include: Mean Firing Rate by Plate (Hz), Mean firing rate, Mean Duration, Number of bursts by channel and well, Mean Inter Burst Interval, Mean ISI within bursts, Mean burst per minute, Mean spikes in a burst and % spikes in a burst. The function also calls plot.distributions to calculate and plot burst feature distributions.

Examples

data("S")  
#IGM.plot.plate.summary.for.bursts(S,"/Analysis")