Usage
make.raster(RobjectFile = NULL, outputdir = NULL, well.for.raster = NULL, interval.for.raster = NULL, show.bursts = F, show.burst.number = F, show.networkspikes = F, show.ns.number = F)
Arguments
RobjectFile
Default value is NULL, in which case tcltk pop-up file chooser will prompt user to select an 's' object. Otherwise, provide a full path to to a .RData 's' object that contains burst and network data.
outputdir
A directory (character string in quotes) where pdf is to be saved.
Default is NULL, in which case the plot will be saved in the directory RobjectFile location.
well.for.raster
A well name, character string, from plate. e.g. well.for.raster="A3".
Default is NULL, in which case first well in plate will appear in plot.
interval.for.raster
A vector of min and max time (s) for raster marks. e.g. interval.for.raster=c(30,60)
Default is NULL, in which case the whole recording interval will be used.
show.bursts
A boolean value sets whether bursts are indicated by red horizontal line (TRUE/FALSE)
e.g. show.bursts=FALSE
Default=FALSE
show.burst.number
A boolean value sets whether # spikes/bursts are indicated (TRUE/FALSE).
show.bursts must be set to true in order that show.burst.number=T
e.g. show.burst.number=FALSE
Default=FALSE
show.networkspikes
A boolean value sets whether network spikes are indicated by green vertical line (TRUE/FALSE)
e.g. show.networkspikes=FALSE
Default=FALSE
show.ns.number
A boolean value sets whether # electrodes in network spikes are indicated (TRUE/FALSE)
e.g. show.ns.number=FALSE
Default=FALSE