ExampleData

A list containing the data needed to use the <code>image</code> function.

datasets

Performs mQTL (methylation quantitative-trait locus) mapping in
bisulfite sequencing studies by fitting a binomial mixed model and then
incorporating the allelic-specific methylation pattern. Based on Fan, Yue;
Vilgalys, Tauras P.; Sun, Shiquan; Peng, Qinke; Tung, Jenny; Zhou, Xiang
(2019) <doi:10.1101/615039>.

Michael Kleinsasser

IMAGE

Integrated Methylation QTL Mapping and Allele-Specific Analysis

Xiang Zhou

Shiquan Sun

Yue Fan

ExampleData function

A <code>list</code> three elements:<dl class="dl-horizontal">
<dt>data</dt><dd>A <code>data.frame</code> with columns r, y, r1, r2, y1, y2</dd>
<dt>geno</dt><dd>A <code>data.frame</code> with columns hap1 and hap2</dd>
<dt>K</dt><dd>A 100X100 matrix</dd>
</dl>

Format

Example data set to test the IMAGE method — ExampleData

A <code>list</code> three elements:<dl class='dl-horizontal'>
<dt>data</dt><dd>A <code>data.frame</code> with columns r, y, r1, r2, y1, y2</dd>
<dt>geno</dt><dd>A <code>data.frame</code> with columns hap1 and hap2</dd>
<dt>K</dt><dd>A 100X100 matrix</dd>
</dl>

ExampleData: Example data set to test the IMAGE method

Description

Usage

Arguments

Format