jaguar_example


This is a list object containing a simulated eQTL data 


eQTL

eQTL dataset

Implements a novel score test that measures 1) the overall shift in the gene expression due to genotype (additive genetic effect), and 2) group-specific changes in gene expression due to genotype (interaction effect) in a mixed-effects model framework.

Chaitanya Acharya

JAGUAR

Joint Analysis of Genotype and Group-Specific Variability Using
a Novel Score Test Approach to Map Expression Quantitative
Trait Loci (eQTL)

jaguar_example function

List containing gene expression data as a matrix with genes on rows and samples in columns, genotype data in allele dosage format with SNPs on rows and samples in columns, gene and SNP information in BED format.

jaguar_example: Simulated multi-tissue eQTL data

Description

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