LDlinkR

LDlinkR-package

<img src="figures/logo.png?package=LDlinkR&version=1.4.0" style="float: right" alt="logo" width="120">
Provides access to the 'LDlink' API (<a href="https://ldlink.nih.gov/?tab=apiaccess">https://ldlink.nih.gov/?tab=apiaccess</a>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) tools:::Rd_expr_doi("10.1038/nature15393") data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) tools:::Rd_expr_doi("10.1093/bioinformatics/btv402").

internal

Provides access to the 'LDlink' API (<https://ldlink.nih.gov/?tab=apiaccess>)
using the R console. This programmatic access facilitates researchers who are
interested in performing batch queries in 1000 Genomes Project (2015) <doi:10.1038/nature15393>
data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying
germline variants in human population groups of interest. For more details, please see
Machiela et al. (2015) <doi:10.1093/bioinformatics/btv402>.

Timothy A. Myers

Calculating Linkage Disequilibrium (LD) in Human Population
Groups of Interest

Stephen J. Chanock

Mitchell J. Machiela

LDlinkR-package function

Maintainer: Timothy A. Myers <a href="/link/myersta%40mail.nih.gov?package=LDlinkR&version=1.4.0" data-mini-rdoc="LDlinkR::myersta@mail.nih.gov">myersta@mail.nih.gov</a> (<a href="https://orcid.org/0000-0001-8127-3446">ORCID</a>)
Authors:<ul>
<li>Stephen J. Chanock <a href="/link/chanocks%40mail.nih.gov?package=LDlinkR&version=1.4.0" data-mini-rdoc="LDlinkR::chanocks@mail.nih.gov">chanocks@mail.nih.gov</a></li>
<li>Mitchell J. Machiela <a href="/link/mitchell.machiela%40nih.gov?package=LDlinkR&version=1.4.0" data-mini-rdoc="LDlinkR::mitchell.machiela@nih.gov">mitchell.machiela@nih.gov</a> (<a href="https://orcid.org/0000-0001-6538-9705">ORCID</a>)</li>
</ul>

Author

<img src='figures/logo.png' style='float: right' alt='logo' width='120' />
Provides access to the 'LDlink' API (<a href='https://ldlink.nih.gov/?tab=apiaccess'>https://ldlink.nih.gov/?tab=apiaccess</a>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) tools:::Rd_expr_doi("10.1038/nature15393") data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) tools:::Rd_expr_doi("10.1093/bioinformatics/btv402").

LDlinkR: Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest — LDlinkR-package

Maintainer: Timothy A. Myers <a href='mailto:myersta@mail.nih.gov'>myersta@mail.nih.gov</a> (<a href='https://orcid.org/0000-0001-8127-3446'>ORCID</a>)
Authors:<ul>
<li>Stephen J. Chanock <a href='mailto:chanocks@mail.nih.gov'>chanocks@mail.nih.gov</a></li>
<li>Mitchell J. Machiela <a href='mailto:mitchell.machiela@nih.gov'>mitchell.machiela@nih.gov</a> (<a href='https://orcid.org/0000-0001-6538-9705'>ORCID</a>)</li>
</ul>

LDlinkR-package: LDlinkR: Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest

Description

Arguments

Author

See Also