LOLA (version 1.2.2)

userSets: An example set of regions, sampled from the example database.

Description

A dataset containing a few sample regions.

Usage

data(sample_input)

Value

No return value.

Format

A GRangesList object

Examples

## Not run: 
#  This is how I produced the sample data sets:
# dbPath = system.file("extdata", "hg19", package="LOLA")
# regionDB = loadRegionDB(dbLocation= dbPath)
# userSetA = reduce(do.call(c, (sampleGRL(regionDB$regionGRL,
# prop=c(.1,.25,.05,.05,0)))))
# userSetB = reduce(do.call(c, (sampleGRL(regionDB$regionGRL,
# prop=c(.2,.05,.05,.05,0)))))
# 
# userSets = GRangesList(setA=userSetA, setB=userSetB)
# userUniverse = reduce(do.call(c, regionDB$regionGRL))
# save(userSets, file="sample_input.RData")
# save(userUniverse, file="sample_universe.RData")
# ## End(Not run)