denoise

Point density is estimated using a Gaussian mixture model and points in low
density regions are considered as noise and removed.

Read, register and compare point sets from single molecule localization microscopy.

Jean-Karim Heriche

LOMAR

Localization Microscopy Data Analysis

denoise function

<dl><dt>points</dt>
<dd>a data frame with columns x,y,z.</dd>
<dt>k</dt>
<dd>integer, number of mixture components for the GMM</dd>
<dt>prob</dt>
<dd>probability level in the range [0,1] to identify high density regions</dd></dl>

Arguments

denoise — denoise

<dl>

<dt>points</dt>
<dd>a data frame with columns x,y,z.</dd>


<dt>k</dt>
<dd>integer, number of mixture components for the GMM</dd>


<dt>prob</dt>
<dd>probability level in the range [0,1] to identify high density regions</dd>

</dl>

denoise: denoise

Description

Usage

Value

Arguments