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LPS

R package implementing the Linear Predictor Score model, and enhanced heat maps.

Availability

A short presentation of the project can be found on my personnal website.

Release sources and builds can be found in the CRAN repository :

Development sources are freely available on GitHub :

All this material is freely distributed under the GNU Public License 3, shipped with sources and builds.

Support

Bugs, suggestions and help requests should be submitted using GitHub's Issues (see 'Availability').

Changelog

Release updates are tracked by the NEWS.Rd file, browsable on the CRAN repository (see 'Availability').

Individual commits can be followed on GitHub (see 'Availability').

Credits

Sylvain Mareschal <maressyl@gmail.com>

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Version

Install

install.packages('LPS')

Monthly Downloads

181

Version

1.0.16

License

GPL (>= 3)

Maintainer

Sylvain Mareschal

Last Published

May 29th, 2021

Functions in LPS (1.0.16)

clusterize

Hierarchical clustering heat maps
LPS.coeff

Linear Predictor Score coefficient computation
Rosenwald dataset

Rosenwald et al. Lymphochip data
heat.map

Enhanced heat map ploting
OVL

Overlap quantification for LPS object
LPS

Linear Predictor Score fitting
heat

Heatmap palette generation
heat.scale

Plots a heat map color scale, for legend
predict.LPS

Predict method for LPS objects
surv.colors

Produces visual representation of survival data
plot.LPS

Plot method for LPS objects
surv.scale

Plots a survival color scale, for legend