calc_trackInd

Function to conveniently calculate the trackInd variable that is needed internally when fitting a model to longitudinal data with multiple tracks.

A variety of latent Markov models, including hidden Markov models, hidden semi-Markov models,
state-space models and continuous-time variants can be formulated and estimated within the same framework via directly maximising the likelihood function using the so-called forward algorithm.
Applied researchers often need custom models that standard software does not easily support.
Writing tailored 'R' code offers flexibility but suffers from slow estimation speeds.
We address these issues by providing easy-to-use functions (written in 'C++' for speed) for common tasks like the forward algorithm.
These functions can be combined into custom models in a Lego-type approach, offering up to 10-20 times faster estimation via standard numerical optimisers.
To aid in building fully custom likelihood functions, several vignettes are included that show how to simulate data from and estimate all the above model classes.

Jan-Ole Koslik

LaMa

Fast Numerical Maximum Likelihood Estimation for Latent Markov
Models

calc_trackInd function

<dl><dt>ID</dt>
<dd>ID variable of track IDs that is of the same length as the data to be analysed</dd></dl>

Arguments

Calculate the index of the first observation of each track based on an ID variable — calc_trackInd

<dl>

<dt>ID</dt>
<dd>ID variable of track IDs that is of the same length as the data to be analysed</dd>

</dl>

calc_trackInd: Calculate the index of the first observation of each track based on an ID variable

Description

Usage

Value

Arguments

Examples