load.all.data

Loads and returns all the data available in the specified directory for a given site.
All timeseries data are merged by &#8220;datetime&#8221; into a single <a href="/link/data.frame?package=LakeMetabolizer&version=1.5.5" data-mini-rdoc="LakeMetabolizer::data.frame">data.frame</a>.
Data are identified by the column header information.

file

A collection of tools for the calculation of freewater metabolism
from in situ time series of dissolved oxygen, water temperature, and,
optionally, additional environmental variables. LakeMetabolizer implements
5 different metabolism models with diverse statistical underpinnings:
bookkeeping, ordinary least squares, maximum likelihood, Kalman filter,
and Bayesian. Each of these 5 metabolism models can be combined with
1 of 7 models for computing the coefficient of gas exchange across the
air–water interface (k). LakeMetabolizer also features a variety of
supporting functions that compute conversions and implement calculations
commonly applied to raw data prior to estimating metabolism (e.g., oxygen
saturation and optical conversion models).

Jake Zwart

LakeMetabolizer

Tools for the Analysis of Ecosystem Metabolism

Luke Winslow

Ryan Batt

Jessica Corman

Hilary Dugan

Paul Hanson

Aline Jaimes

Jordan Read

Richard Woolway

load.all.data function

<dl><dt>lake.name</dt>
<dd>The file prefix to be matched. For example, &#8220;sparkling&#8221; matches &#8220;sparkling.wtr&#8221; but not &#8220;troutbog.wtr&#8221;</dd>
<dt>data.path</dt>
<dd>The directory to look for files</dd>
<dt>checkMerge</dt>
<dd>Should check merge size before attempting to prevent potential merge problems.</dd></dl>

Arguments

Author

Loads and returns all the data available in the specified directory for a given site.
All timeseries data are merged by &#8220;datetime&#8221; into a single <a href='https://rdrr.io/r/base/data.frame.html'>data.frame</a>.
Data are identified by the column header information.

Attemps to load and merge all timeseries data for a given site name — load.all.data

<dl>

<dt>lake.name</dt>
<dd>The file prefix to be matched. For example, &#8220;sparkling&#8221; matches &#8220;sparkling.wtr&#8221; but not &#8220;troutbog.wtr&#8221;</dd>


<dt>data.path</dt>
<dd>The directory to look for files</dd>


<dt>checkMerge</dt>
<dd>Should check merge size before attempting to prevent potential merge problems.</dd>

</dl>

load.all.data: Attemps to load and merge all timeseries data for a given site name

Description

Usage

Value

Arguments

Author

See Also