LncPath (version 1.1)

getNet: Get the background lncRNA-mRNA interaction network

Description

Get the background lncRNA-mRNA interaction network.

Usage

getNet()

Details

Get the background lncRNA-mRNA interaction network, it was built by intergrating an lncRNA-mRNA co-expression network and the protein-protein interaction network.

References

Subramanian, A., Tamayo, P., Mootha, V.K., Mukherjee, S., Ebert, B.L., Gillette, M.A., Paulovich, A., Pomeroy, S.L., Golub, T.R., Lander, E.S. et al. (2005) Gene set enrichment analysis: a knowledgebased approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A, 102, 15545-15550.

Examples

# NOT RUN {
##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.
LncPathNet <- getNet();
# }