MALDIquantForeign (version 0.14.1)

importMzMl: Import mzML files

Description

This function imports files in mzML file format into MassSpectrum-class or MassPeaks-class objects.

Usage

importMzMl(path, ...)

Value

a list of MassSpectrum-class or MassPeaks-class objects (depending on the centroided argument).

Arguments

path

character, path to directory or file which should be read in.

...

arguments to be passed to import.

Author

Sebastian Gibb

References

https://strimmerlab.github.io/software/maldiquant/,
Definition of mzML format: https://www.psidev.info/mzML

See Also

MassSpectrum-class, MassPeaks-class

Examples

library("MALDIquant")
library("MALDIquantForeign")

## get example directory
exampleDirectory <- system.file("exampledata", package="MALDIquantForeign")

## import
s <- importMzMl(exampleDirectory)