MAST (version 0.931)

plotSCAConcordance: Concordance plots of filtered single vs n-cell assays

Description

This will generate the types of plots shown in the bioinformatics manuscript

Usage

plotSCAConcordance(SCellAssay, NCellAssay, filterCriteria = list(nOutlier = 2,
  sigmaContinuous = 9, sigmaProportion = 9), groups = NULL)

Arguments

SCellAssay

is a SingleCellAssay for the 1-cell per well assay

NCellAssay

is a SingleCellAssay for the n-cell per well assay

filterCriteria

is a list of filtering criteria to apply to the SCellAssay and NCellAssay

groups

is a character vector naming the group within which to perform filtering. NULL by default.