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Read MCMCtree output tree into R to produce time-scaled tree in APE format, and a table of the mean and 95
readMCMCtree(inputPhy, forceUltrametric = TRUE, from.file = TRUE)
file directory of 'Figtree' output from MCMCtree
alters branch lengths at tips so tree is fully ultrametric (default = TRUE)
Logical. Read a tree from file or locally from within R?
apePhy time-scaled output tree from MCMCtree in APE format
nodeAges mean and 95
# NOT RUN { data(MCMCtree.output) attach(MCMCtree.output) # tree and node ages readMCMCtree(MCMCtree.phy, from.file=FALSE) # }
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