MDM (version 1.3)

Multinomial Diversity Model

Description

The multinomial diversity model is a toolbox for relating diversity to complex predictors. It is based on (1) Shannon diversity; (2) the multinomial logit model, and (3) the link between Shannon diversity and the log-likelihood of the MLM.

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Version

Install

install.packages('MDM')

Monthly Downloads

Version

1.3

License

GPL-2 | GPL-3

Maintainer

Glenn Death

Last Published

July 10th, 2013

Functions in MDM (1.3)

eds

Calculate alpha, beta and gamma parametric entropies and diversities

eds1

Calculate alpha, beta and gamma parametric entropies and diversities

entropy.plot

Entropy plot

MDM-package

Multinomial Diversity Model

dev2div

Converts deviances to diversities

anova.mdm

Analysis of Deviance, Entropy and Diversity Tables

ed1

Calculate alpha, beta and gamma true entropies and diversities

simdata

Species abundance data simulator

Calculate alpha, beta and gamma true entropies and diversities

mdm

Fits the parameteric diversity model

spider6

The spider data set

y2p

Scale rows of a species-sites data set