createEmptyArchitecture

dataSetName

type of the chip used for obtaining the data

chipType

path

if TRUE, print details of the process

verbose

Create the architecture required by aroma packages

Preprocessing and analysis of genomic data. 'MPAgenomics'
provides wrappers from commonly used packages to streamline their repeated
manipulation, offering an easy-to-use pipeline. The segmentation of
successive multiple profiles is performed with an automatic choice of
parameters involved in the wrapped packages. Considering multiple profiles
in the same time, 'MPAgenomics' wraps efficient penalized regression methods
to select relevant markers associated with a given outcome.
Grimonprez et al. (2014) <doi:10.1186/s12859-014-0394-y>.

Samuel Blanck

MPAgenomics

Multi-Patient Analysis of Genomic Markers

Quentin Grimonprez

Sjoerd Vosse

Mark van de Wiel

Pierre Neuvial

Henrik Bengtsson

Ilari Scheinin

Guillemette Marot

Inria 

createEmptyArchitecture function

Create aroma architecture — createEmptyArchitecture

Create aroma architecture

createEmptyArchitecture: Create aroma architecture

Description

Usage

Arguments

Value

Details