plotRate

plotRate-methods

Plots the variation of the recombination rate as calculated by <code>object</code>

methods

Local recombination rates are graphically estimated across a genome using Marey maps.

Aurélie Siberchicot

MareyMap

Estimation of Meiotic Recombination Rates Using Marey Maps

plotRate-methods function

<dl>
 <dt>object = "Interpolation"</dt>
<dd>Plots the variation of the recombination rate as calculated by the <code>Interpolation</code>.</dd> <dt>object = "MMSlidingWindow"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMSlidingWindow.</dd> <dt>object = "MMLoess"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMLoess.</dd> <dt>object = "MMSpline3"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMSpline3.</dd>
</dl>

Methods

Aurélie Siberchicot <a href="/link/aurelie.siberchicot%40univ-lyon1.fr?package=MareyMap&version=1.3.7" data-mini-rdoc="MareyMap::aurelie.siberchicot@univ-lyon1.fr">aurelie.siberchicot@univ-lyon1.fr</a> and Clément Rezvoy

Author

plotRate — plotRate-methods

<dl>
 <dt>object = "Interpolation"</dt>
<dd>Plots the variation of the recombination rate as calculated by the <code>Interpolation</code>.</dd>

 <dt>object = "MMSlidingWindow"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMSlidingWindow.</dd>

 <dt>object = "MMLoess"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMLoess.</dd>

 <dt>object = "MMSpline3"</dt>
<dd>Plots the variation of the recombination rate as calculated by MMSpline3.</dd>


</dl>

Aurélie Siberchicot <a href='mailto:aurelie.siberchicot@univ-lyon1.fr'>aurelie.siberchicot@univ-lyon1.fr</a> and Clément Rezvoy

plotRate-methods: plotRate

Description

Arguments

Methods

Author

See Also