MiRSEA (version 1.1.1)

GetPathwayData: Get the gene sets of pathways

Description

Get the gene sets of pathways for the three pathway databases (KEGG; Biocarta; Reactome)

Usage

GetPathwayData(pathway)

Arguments

pathway

choose database of pathway,"kegg","biocarta" or"reactome"

Author

Junwei Han,Siyao Liu

Details

The gene sets of pathways for the three pathway database (KEGG; Biocarta; Reactome)are obtained from the environment variable envData.

Examples

if (FALSE) {

#obtain the gene sets of  kegg pathways.
pathway<-GetPathwayData("kegg")


}