MinimumDistance (version 1.16.0)

MinDistExperiment-class: Class and methods for MinDistExperiment

Description

Class and methods for MinDistExperiment

Usage

"show"(object)
"pedigree"(object)
"pedigree"(object) <- value
"mindist"(object)
"mindist"(object) <- value
"["(x, i, j, ..., drop = FALSE)
"offspring"(object)
"father"(object)
"mother"(object)
"segment2"(object, param = MinDistParam())
"father"(object)
"mother"(object)
"offspring"(object)

Arguments

object

a MinDistExperiment object

value

a ParentOffspring object

x

a MinDistExperiment object

i

a numeric-vector for indexing the rows (optional)

j

a numeric-vector for indexing the columns (optional)

...

additional arguments propogated to subsetting methods for RangedSummarizedExperiment

drop

logical. Whether to simplify a one-row or one-column matrix to a vector. In most cases, this should always be FALSE.

param

a MinDistParam object

Slots

mindist

a matrix

pedigree

a ParentOffspring object