MinDistGRanges

mindist

offspring

father

mother

pedigree


The <code>MinDistGRanges</code> class contains the segmentation of the
father, mother, offspring, and the minimum distance for each
possible parent-offspring trio.  For the parents, the segmentation
results are expected to be in <code>GRanges</code> format.  To accomodate
multiple-offspring families, both the offspring segments and
minimum distance segments should be of class <code>GRangesList</code>
where the length of the list corresponds to the number of
offspring.


Analysis of de novo copy number variants in trios from
high-dimensional genotyping platforms.

Robert Scharpf

MinimumDistance

A Package for De Novo CNV Detection in Case-Parent Trios

MinDistGRanges function

The <code>MinDistGRanges</code> class contains the segmentation of the
father, mother, offspring, and the minimum distance for each
possible parent-offspring trio.  For the parents, the segmentation
results are expected to be in <code>GRanges</code> format.  To accomodate
multiple-offspring families, both the offspring segments and
minimum distance segments should be of class <code>GRangesList</code>
where the length of the list corresponds to the number of
offspring.

MinDistGRanges: Constructor for `MinDistGRanges` class

Description

Usage

Arguments

Examples