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MinimumDistance (version 1.16.0)

filterExperiment: Methods for filtering MinDistExperiment objects

Description

Filter a MinDistExperiment object to exclude markers with missing values in the low-level summaries, exclude markers that lie in segments (granges argument) with small minimum distance values (unlikely to be de novo)

Usage

filterExperiment(object, granges, param)
"filterExperiment"(object, granges, param)
"filterExperiment"(object, granges, param)
"filterExperiment"(object, granges, param)

Arguments

object
A MinDistExperiment
granges
A GRanges, GRangesList, or MinDistGRanges object
param
a MinDistParam object

Value

a MinDistExperiment