ORMDR (version 1.3-2)

ormdr: ORMDR : Odds ratio based multifactor-dimensioinality reduction method

Description

ORMDR usesthe odds ratio as a new quantitative measure of disease risk.

Usage

ormdr(dataset,bestcombi,cs,colresp,CI.Asy,CI.Boot,B)

Arguments

dataset

SNP data set with class variable

bestcombi

best combination from mdr.c function

cs

how to code "case" class

colresp

location of class variable in dataset

CI.Asy

indicator whether asymptotic CI is calculated or not

CI.Boot

indicator whether bootstrap CI is calculated or not

B

number of bootstrap samples

Value

...

Examples

data(sample.dat)
z<-mdr.c(sample.dat, colresp=21, cs=1, combi=2, cv.fold = 10)
ormdr(sample.dat,bestcombi=as.numeric(z$best.combi),cs=1,colresp=21,CI.Asy=TRUE,CI.Boot=TRUE,B=1000)