OlinkAnalyze (version 4.2.0)

norm_internal_subset: Internal subset normalization function

Description

This function performs subset normalization using a subset of the samples from either or both reference and non-reference datasets. When all samples from each dataset are used, the function performs intensity normalization.

Usage

norm_internal_subset(
  ref_df,
  ref_samples,
  ref_name,
  ref_cols,
  not_ref_df,
  not_ref_samples,
  not_ref_name,
  not_ref_cols
)

Value

Tibble or ArrowObject with the normalized dataset.

Arguments

ref_df

The reference dataset to be used in normalization (required).

ref_samples

Character vector of sample identifiers to be used for adjustment factor calculation in the reference dataset (required).

ref_name

Project name of the reference dataset (required).

ref_cols

Named list of column names in the reference dataset (required).

not_ref_df

The non-reference dataset to be used in normalization (required).

not_ref_samples

Character vector of sample identifiers to be used for adjustment factor calculation in the non-reference dataset (required).

not_ref_name

Project name of the non-reference dataset (required).

not_ref_cols

Named list of column names in the non-reference dataset (required).

Author

Klev Diamanti