LocationsTrialDataSmall


  This data set gives the locations of individuals in the file MicrosatTrialDataSmall to be used as a test data only.  Space or tab delimited text file with the location information for the individuals.  The columns are LocationName, LocationNumber, Latitude, and Longitude.  Note that the first two columns must be in the same order as the MicrosatTrialDataSmall.


datasets

Used primarily for estimates of allele frequency surfaces from point estimates.
It can also place individuals of unknown origin back onto the geographic map with great accuracy.
Additionally, it can place admixed individuals by estimating contributing fractions at each
location on a map. Lastly, it can rank SNPs by their ability to differentiate populations.
See "Fast Spatial Ancestry via Flexible Allele Frequency Surfaces" (John Michael Ranola, John
Novembre, Kenneth Lange) in Bioinformatics 2014 for more info.

John Michael O Ranola

OriGen

Fast Spatial Ancestry via Flexible Allele Frequency Surfaces

LocationsTrialDataSmall function

A text file containing names and locations.

LocationsTrialDataSmall: Locations of individuals in MicrosatTrialDataSmall

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