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PAGI (version 1.0)

PAGI-internal: PAGI internal functions

Description

These are functions internally called by other functions in the package PAGI and not meant to be called by the user.

Usage

RandomWalk2igraph(igraphM,VertexWeight,EdgeWeight=TRUE,gamma=0.7)
rw(W,p0,gamma)
calTest(A, class.labels)
CalGIF2(obs.Test, netWorkdata)
PAGI.EnrichmentScore(gene.list, gene.set, correl.vector = NULL)
PAGI.EnrichmentScore2(gene.list, gene.set, correl.vector = NULL)
initializePAGIExample()
initializePAGI()

Arguments