Get the concordance between two
getConcordance(singleCellRef, singleCellcomp, groups = NULL,
fun.natural = expavg, fun.cycle = logmean)
"reference" SingleCellAssay
"comparison" SingleCellAssay
character vector giving variable(s) on which the comparison is conditioned
function to transform the SingleCellAssays to a mRNA proportional level
inverse function of fun.natural
concordance between two assays
Return the concordance between two assays (i.e. single cell and hundred cell)
The "average" of singleCellRef
(after adjusting for the number of cells) and
singleCellComp
are taken per gene, per groups
.
A data.frame
with one row per gene-groups
is returned with some additional columns.