envData

DiseaseInfList

EHMNAddPathInfNetwork

KEGGAddPathInfNetwork

MetaboliteInf

ProstateCandidates

ProstateSeeds


  The variables in the environment variable envData of the system.


file

The package can prioritize the candidate disease metabolites based on the assumption
that functionally related metabolites tend to associate with the same or similar
diseases in the context of metabolic pathway. The PROFANCY package (1) prioritizes the
disease metabolites from global functional similarity and local modularity of the
metabolic network; (2) allows users to select default metabolites or input their
interested metabolites as seed nodes or candidate nodes (3) can prioritize the candidate
metabolites in KEGG or EHMN metabolic network.

Qianlan Yao

PROFANCY

The package can prioritize candidate disease metabolites based
on global functional relationships between metabolites in the
context of metabolic pathways

envData function

Format

The variables in the environment variable envData of the system

envData: The variables in the environment variable envData of the system

Description

Arguments

Format

Details

See Also