Learn R Programming

PROMISE (version 1.24.0)

PRojection Onto the Most Interesting Statistical Evidence

Description

A general tool to identify genomic features with a specific biologically interesting pattern of associations with multiple endpoint variables as described in Pounds et. al. (2009) Bioinformatics 25: 2013-2019

Copy Link

Version

Version

1.24.0

License

GPL (>= 2)

Maintainer

Stan Pounds

Last Published

February 15th, 2017

Functions in PROMISE (1.24.0)

spearman.rstat

Function to Calculate Spearman Correlation Statistics
avg.abs.genestat

Function to Compute Gene Set Statistics
PROMISE

PRojection onto the Most Interesting Statistical Evidence
promise.genestat

Function to Calculate PROMISE Statistics
jung.rstat

Function to Compute Jung's Statistics
sampGeneSet

An Example Gene Set Collection
sampExprSet

An Example Expression Set
promise.pattern

PROMISE pattern
PROMISE-package

PRojection Onto the Most Interesting Statistical Evidence
phPatt

Phenotype Pattern Definition Set