getSmoothLocusData.CBS

CBS.getSmoothLocusData

getSmoothLocusData,CBS-method

methods

internal

Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome.  Both tumor-normal paired and tumor-only analyses are supported.

Henrik Bengtsson

PSCBS

Analysis of Parent-Specific DNA Copy Numbers

Pierre Neuvial

Venkatraman E. Seshan

Adam B. Olshen

Paul T. Spellman

Richard A. Olshen

Frank E Harrell Jr

getSmoothLocusData.CBS function

<dl> <dt>fit</dt>
<dd>An <code>CBS</code> object.</dd> <dt>by</dt>
<dd>A <code><a href="/link/numeric?package=PSCBS&version=0.67.0" data-mini-rdoc="PSCBS::numeric">numeric</a></code> scalar specifying the bin size.</dd> <dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Author

Gets smoothed locus-level data — getSmoothLocusData.CBS

<dl>

 <dt>fit</dt>
<dd>An <code>CBS</code> object.</dd>

 <dt>by</dt>
<dd>A <code><a href='https://rdrr.io/r/base/numeric.html'>numeric</a></code> scalar specifying the bin size.</dd>

 <dt>...</dt>
<dd>Not used.</dd>

</dl>

Gets smoothed locus-level data

getSmoothLocusData.CBS: Gets smoothed locus-level data

Description

Usage

Value

Arguments

Author

See Also