ploidy.AbstractCBS

AbstractCBS.ploidy

ploidy,AbstractCBS-method

AbstractCBS.ploidy&lt;-

ploidy&lt;-.AbstractCBS

ploidy&lt;-,AbstractCBS-method

AbstractCBS.setPloidy

setPloidy.AbstractCBS

setPloidy,AbstractCBS-method

AbstractCBS.adjustPloidyScale

adjustPloidyScale.AbstractCBS

adjustPloidyScale,AbstractCBS-method

adjustPloidyScale.PairedPSCBS

adjustPloidyScale

ploidy

ploidy&lt;-

setPloidy

methods

internal

Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome.  Both tumor-normal paired and tumor-only analyses are supported.

Henrik Bengtsson

PSCBS

Analysis of Parent-Specific DNA Copy Numbers

Pierre Neuvial

Venkatraman E. Seshan

Adam B. Olshen

Paul T. Spellman

Richard A. Olshen

Frank E Harrell Jr

ploidy.AbstractCBS function

<dl> <dt>fit</dt>
<dd>An <code>AbstractCBS</code> object.</dd> <dt>value</dt>
<dd>An <code><a href="/link/integer?package=PSCBS&version=0.67.0" data-mini-rdoc="PSCBS::integer">integer</a></code> (in \(1,2,\ldots\)) specifying the genome ploidy .</dd> <dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Author

Gets and sets ploidy — ploidy.AbstractCBS

<dl>

 <dt>fit</dt>
<dd>An <code>AbstractCBS</code> object.</dd>

 <dt>value</dt>
<dd>An <code><a href='https://rdrr.io/r/base/integer.html'>integer</a></code> (in \(1,2,\ldots\)) specifying the genome ploidy .</dd>

 <dt>...</dt>
<dd>Not used.</dd>

</dl>

Gets and sets ploidy

ploidy.AbstractCBS: Gets and sets ploidy

Description

Usage

Value

Arguments

Author

See Also