PSCBS (version 0.67.0)

report.AbstractCBS: Generates a report of the segmentation results

Description

Generates a report of the segmentation results. Currently reports can be generated for segmentation results of class CBS and PairedPSCBS.

Usage

# S3 method for AbstractCBS
report(fit, sampleName=getSampleName(fit), studyName, ..., rspTags=NULL,
  rootPath="reports/", .filename="*", skip=TRUE, envir=new.env(), verbose=FALSE)

Value

Returns the pathname of the generated PDF.

Arguments

fit

An AbstractCBS object.

sampleName

A character string specifying the name of the sample segmented.

studyName

A character string specifying the name of study/project.

...

Optional arguments passed to the RSP template.

rspTags

Optional character vector of tags for further specifying which RSP report to generate.

rootPath

The root directory where to write the report.

verbose

See Verbose.

Author

Henrik Bengtsson

See Also

For more information see AbstractCBS.