computeMatchRTFractions

A data.frame as computed by peakSegmentation()

qMBR

A data.frame as computed by inMatchWindow()

qMBRSeg_Dist_inGroup

qMBRSeg_Dist_inGroup might be empty if there are only singlets (transferred and genuine), but then the scores will be pretty
boring as well (100

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the
MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool).
Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format.
Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015)
<doi:10.1021/acs.jproteome.5b00780>.

computeMatchRTFractions: Combine several data structs into a final picture for segmentation incurred by 'Match-between-runs'.

Description

Usage

Arguments

Value