PTXQC (version 1.0.4)

plot_IDsOverRT: Plot IDs over time for each Raw file.

Description

The plots shows the charge distribution per Raw file. The output of 'mosaicize()' can be used directly.

Usage

plot_IDsOverRT(data, x_lim = range(data$RT), y_max = max(data$counts))

Arguments

data

A data.frame with columns as described above

x_lim

Limits of the x-axis (2-tuple)

y_max

Maximum of the y-axis (single value)

Value

GGplot object

Details

The input is a data.frame with columns 'RT' - RT in seconds, representing one bin 'counts' - number of IDs at this bin 'fc.raw.file' - name of the Raw file where each row represents one bin in RT.

At most nine(!) Raw files can be plotted. If more are given, an error is thrown.

Examples

# NOT RUN {
 data = data.frame(fc.raw.file = rep(paste('file', letters[1:3]), each=30),
                            RT = seq(20, 120, length.out = 30),
                        counts = c(rnorm(30, 400, 20), rnorm(30, 250, 15), rnorm(30, 50, 15)))
 plot_IDsOverRT(data)

# }