qualGaussDev

Measure for centeredness around 0.
Highest score is 1, worst score is 0.

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the
MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool).
Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format.
Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015)
<doi:10.1021/acs.jproteome.5b00780>.

Chris Bielow

PTXQC

Quality Report Generation for MaxQuant and mzTab Results

Juliane Schmachtenberg

Swenja Wagner

Patricia Scheil

Tom Waschischek

Guido Mastrobuoni

qualGaussDev function

<dl><dt>mu</dt>
<dd>Center of Gaussian</dd>
<dt>sd</dt>
<dd>SD of Gaussian</dd></dl>

Arguments

Compute probability of Gaussian (mu=m, sd=s) at a position 0, with reference 
to the max obtainable probability of that Gaussian at its center. — qualGaussDev

<dl>

<dt>mu</dt>
<dd>Center of Gaussian</dd>


<dt>sd</dt>
<dd>SD of Gaussian</dd>

</dl>

qualGaussDev: Compute probability of Gaussian (mu=m, sd=s) at a position 0, with reference to the max obtainable probability of that Gaussian at its center.

Description

Usage

Value

Arguments