qualMedianDist

Ranges between 0 (worst score) and 1 (best score).
Input must be between [0,1].
Deviations from the median of the sample represent the score for each sample point.

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the
MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool).
Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format.
Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015)
<doi:10.1021/acs.jproteome.5b00780>.

Chris Bielow

PTXQC

Quality Report Generation for MaxQuant and mzTab Results

Juliane Schmachtenberg

Swenja Wagner

Patricia Scheil

Tom Waschischek

Guido Mastrobuoni

qualMedianDist function

<dl><dt>x</dt>
<dd>A vector numeric values between [0,1]</dd></dl>

Arguments

Quality metric which measures the absolute distance from median. — qualMedianDist

<dl>

<dt>x</dt>
<dd>A vector numeric values between [0,1]</dd>

</dl>

qualMedianDist: Quality metric which measures the absolute distance from median.

Description

Usage

Value

Arguments