PhenStat (version 2.6.0)

parserOutputSummaryLR: Method "parserOutputSummaryLR"

Description

Parsers model output summary and returns it in readable named vector format

Usage

parserOutputSummaryLR(linearRegressionOutput)

Arguments

linearRegressionOutput

linear regression output that comes from the MM methods; mandatory argument

Value

Returns a named vector with logistic regression model output summary results

References

Karp N, Melvin D, Sanger Mouse Genetics Project, Mott R (2012): Robust and Sensitive Analysis of Mouse Knockout Phenotypes. PLoS ONE 7(12): e52410. doi:10.1371/journal.pone.0052410 West B, Welch K, Galecki A (2007): Linear Mixed Models: A practical guide using statistical software New York: Chapman & Hall/CRC 353 p.

See Also

PhenTestResult

Examples

    file <- system.file("extdata", "testLR.csv", package="PhenStat")
    testLR <- PhenList(dataset=read.csv(file),
            testGenotype="Mock")
    testLR2 <- LRDataset(testLR,"V2")
    resultLR <- testDataset(testLR2,
            depVariable="V2",         
            method="LR")
    linearRegressionOutput <- analysisResults(resultLR)
    parserOutputSummaryLR(linearRegressionOutput)