PhenStat (version 2.6.0)

parserOutputTFSummary: Method "parserOutputTFSummary"

Description

Parsers model output summary from TF framework and returns it in readable named vector format

Usage

parserOutputTFSummary(linearRegressionOutput)

Arguments

linearRegressionOutput

linear regression output that comes from the TF method; mandatory argument

Value

Returns a named vector with model output summary results

References

Karp N, Melvin D, Sanger Mouse Genetics Project, Mott R (2012): Robust and Sensitive Analysis of Mouse Knockout Phenotypes. PLoS ONE 7(12): e52410. doi:10.1371/journal.pone.0052410 West B, Welch K, Galecki A (2007): Linear Mixed Models: A practical guide using statistical software New York: Chapman & Hall/CRC 353 p.

See Also

PhenTestResult

Examples

    file <- system.file("extdata", "test6_RR.csv", package="PhenStat")
    test <- PhenList(dataset=read.csv(file),
            testGenotype="Oxr1/Oxr1")
    result <- testDataset(test,
            depVariable="Ca",
            method="TF",
            dataPointsThreshold=2)
    linearRegressionOutput <- analysisResults(result)
    parserOutputTFSummary(linearRegressionOutput)