contour.pred.PrevMap

an object of class "pred.PrevMap".

a character indicating the type of prediction to display: 'prevalence', 'odds', 'logit' or 'probit'.

type

character indicating which summary to display: 'predictions','quantiles', 'standard.errors' or 'exceedance.prob'; default is 'predictions'. If <code>summary="exceedance.prob"</code>, the argument <code>type</code> is ignored.

summary

further arguments passed to <code><a rd-options="" href="/link/contour?package=PrevMap&version=1.5.4" data-mini-rdoc="PrevMap::contour">contour</a></code>.

<code>plot.pred.PrevMap</code> displays contours of predictions obtained from <code><a rd-options="" href="/link/spatial.pred.linear.MLE?package=PrevMap&version=1.5.4" data-mini-rdoc="PrevMap::spatial.pred.linear.MLE">spatial.pred.linear.MLE</a></code>, <code><a rd-options="" href="/link/spatial.pred.linear.Bayes?package=PrevMap&version=1.5.4" data-mini-rdoc="PrevMap::spatial.pred.linear.Bayes">spatial.pred.linear.Bayes</a></code>,<code><a rd-options="" href="/link/spatial.pred.binomial.MCML?package=PrevMap&version=1.5.4" data-mini-rdoc="PrevMap::spatial.pred.binomial.MCML">spatial.pred.binomial.MCML</a></code> and <code><a rd-options="" href="/link/spatial.pred.binomial.Bayes?package=PrevMap&version=1.5.4" data-mini-rdoc="PrevMap::spatial.pred.binomial.Bayes">spatial.pred.binomial.Bayes</a></code>.

Provides functions for both likelihood-based
and Bayesian analysis of spatially referenced prevalence data. For a tutorial on the use of the R package, see Giorgi and Diggle (2017) <doi:10.18637/jss.v078.i08>.

Emanuele Giorgi

PrevMap

Geostatistical Modelling of Spatially Referenced Prevalence Data

contour.pred.PrevMap function

further arguments passed to <code><a rd-options='' href='contour'>contour</a></code>.

<code>plot.pred.PrevMap</code> displays contours of predictions obtained from <code><a rd-options='' href='spatial.pred.linear.MLE'>spatial.pred.linear.MLE</a></code>, <code><a rd-options='' href='spatial.pred.linear.Bayes'>spatial.pred.linear.Bayes</a></code>,<code><a rd-options='' href='spatial.pred.binomial.MCML'>spatial.pred.binomial.MCML</a></code> and <code><a rd-options='' href='spatial.pred.binomial.Bayes'>spatial.pred.binomial.Bayes</a></code>.

contour.pred.PrevMap: Contour plot of a predicted surface

Description

Usage

Arguments